This map highlights the wealth of expertise in each of the 3 Enabling Technology Areas across Europe. Click on the pins to view centres of expertise, facilities and capabilities and how to access them.
This will be regularly updated over the lifetime of CarboMet and it is anticipated that this will be a collective resource for all to reference and contribute to.
Is something missing? Contact firstname.lastname@example.org with the details so that it can be added to our map.
Online Tools and Databases
CASPER – a tool for calculating NMR chemical shifts of oligo- and polysaccharides
CAZY – Carbohydrate Active Enzymes – describes the families of structurally-related catalytic and carbohydrate binding modules (or functional domains) of enzymes that degrade, modify or create glycosidic bonds
DAGR – Database of Anti-Glycan Reagents – use to search and identify antibodies and reagent lectins to various carbohydrates.
Glycan Library – a list of approximately 830 lipid-linked sequence-defined glycan probes derived from diverse natural sources or chemically synthesised
GlycoBase 3.2 – a database of over 650 N- and O- linked glycan structures HPLC, UPLC, exoglycosidase sequencing and mass spectrometry (MALDI-MS, ESI-MS, ESI-MS/MS, LC-MS, LC-ESI-MS/MS) data
Glyco3D – a portal of 3D structures of mono, di, oligo and polysaccharides and carbohydrate recognizing proteins (lectin, monoclonal antibodies, glycosyltransferases and glycosaminoglycan binding proteins
Glycan Builder – a software library and set of tools to allow for the rapid drawing of glycan structures with support for all of the most common symbolic notation formats
GlycoDomainViewer – an online resource to study site glycosylation with respect to protein context and conservation
GlyMAP – an online resource mapping out the variational landscape of glyco-active enzymes
GlycoMod – an online tool to predict oligosaccharide structures on proteins from experimentally determined masses
GlycoMiner/GlycoPattern – software tools designed to detect, characterize and perform relative quantitation of N-glycopeptides based on LC-MS runs
Glycosciences.de – a collection of databases and bioinformatics tools for glycobiology and glycomics
MonosaccharideDB – a comprehensive reference source for monosaccharide notation
NetOGlyc – next generation prediction of O-glycosylation sites on proteins
SugarBind – a database of known carbohydrate sequences to which pathogenic organisms (bacteria, toxins and viruses) specifically adhere
SweetUnityMol – software to display 3-D structures of carbohydrates, polysaccharides and glycoconjugates
UniCarbKB – online information storage and search platform for glycomics and glycobiology research
UniProtKB – the universal protein sequence database with information on glycosylated proteins